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algnmnt_132.txt from eXtensible Genome Data Broker at Krugle

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ALIGN calculates a global alignment of two sequences
 version 2.0uPlease cite: Myers and Miller, CABIOS (1989) 4:11-17
>seq1                                               115 nt vs.
>seq2                                                86 nt
scoring matrix: DNA, gap penalties: -16/-4
68.7% identity;		Global alignment score: 239

               10        20        30        40        50        60
seq1   GTTAGTTGCATATAAACAAGACATCTTATTTTCCCGTATCAGTGTTCAAACATGGTTTTG
       :::::::::::::::: :::::::                             :::::: 
>seq2  GTTAGTTGCATATAAAGAAGACAT-----------------------------GGTTTTA
               10        20                                     30 

               70        80        90       100       110     
seq1   TTCTTTATTCTATGCATCCACAGCTTAAATGCAATTTTGTTTGAACATTGATTAG
       ::::::::  :::: ::: ::: ::::::::::::::::::::::::::::::::
>seq2  TTCTTTATGTTATGTATCGACAACTTAAATGCAATTTTGTTTGAACATTGATTAG
              40        50        60        70        80      

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eXtensible Genome Data Broker

The xGDB project provides scientists with an online portal for the integration of diverse sources of genomic data. Portals allow researchers to effectively target a specific scientific question by customizing their interactions with available data.

Project homepage: http://sourceforge.net/projects/xgdb
Programming language(s): JavaScript,Perl,PHP
License: other

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