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site_map.php from eXtensible Genome Data Broker at Krugle


Show site_map.php syntax highlighted

<?php
if(empty($SITEDEF_H)){require('SITEDEF.php');}
if(empty($PARAM_H)){require('getPARAM.php');}
require('SSI_GDBprep.php');
virtual("${CGIPATH}SSI_GDBgui.pl/TWO_COLUMN_HEADER/" . $SSI_QUERYSTRING);
?>

<div align="center">
<P align="left"><font size=5 color="#000000"><b><?php echo $SITENAMEshort; ?> Site Map</b></font></P>
<P align="left">This is the information distribution site for <?php echo $SITENAMEshort; ?> (<?php echo $LATINORGN; ?> DataBase). Clicking on the links found on the left will lead you to pages which allow you to access the database and learn more about our work. The controls at the top of the page will allow you to jump to a more specific location in the database. More detailed information on these links and controls can be found below.</P><BR>

<P align="left"><font size=5 color="#5F5F5F"><B>Links:</B></font></P>
<P align="left"><A href="<?php echo $GDBDIR; ?>"><?php echo $SITENAMEshort; ?> Home</A>:<BR>This is the entry point to the database. This page gives a general description of the motivation for developing <?php echo $SITENAMEshort; ?>, and is also the portal for announcements as to improvements and extensions of <?php echo $SITENAMEshort; ?>.</P>
<P align="left"><A href='<?php echo "${GDBDIR}tutorial/index.html"; ?>'>Search <?php echo $SITENAMEshort; ?></A>:<BR>This webpage gives examples of the search capabilities of <?php echo $SITENAMEshort; ?> and instruction as to the use of the search control found at the top of each <?php echo $SITENAMEshort; ?> webpage.</P>
<P align="left"><A href='<?php echo "${CGIPATH}blastGDB.pl"; ?>'><?php echo $SITENAMEshort; ?> Blast</A>:<BR>This application interface allows you to (PRIVATELY) integrate your own data with that of the database through analysis with the BLAST suite of local alignment programs. For more detailed information look <A href='<?php echo "${GDBDIR}tutorial/index.html"; ?>'>here</A>.</P>
<P align="left"><A href="<?php echo $GSQwebpath; ?>"><?php echo $SITENAMEshort; ?> GeneSeqer</A>:<BR>This application interface allows you to (PRIVATELY) integrate your own data with that of the database through analysis with the GeneSeqer spliced alignment program. For more detailed information look <A href='<?php echo "${GDBDIR}tutorial/index.html"; ?>'>here</A>.</P>
<P align="left"><A href="#">Site Description</A>:<BR>You're reading it!!</P>
<P align="left"><A href='<?php echo "${GDBDIR}tutorial/index.html"; ?>'>Tour/Tutorial</A>:<BR>This webpage offers a more detailed look at the functionalities of the <?php echo $SITENAMEshort; ?> database. Here we present a step-by-step account of the intended and alternative uses of <?php echo $SITENAMEshort; ?>.</P>
<BR>
<P align="left"><font size=5 color="#5F5F5F"><B>Controls:</B></font></P>
<P align="left"><font color="#0000FF">Quick Search:</font><BR>This control allows you to query <?php echo $SITENAMEshort; ?>. You may choose to query by sequence ID (in a specific library or in all libraries), annotated description, user description, or using quick search to find as much information as possible. For more detailed instructions as to the use of this control look <A href='<?php echo "${GDBDIR}tutorial/index.html"; ?>'>here</A>.</P>
<P align="left"><font color="#0000FF">Chromosome -- Start -- End
-- Retrieve:</font><BR>This control allows you to jump immediately to a specific chromosomal region. You will then be able to view detailed information about the EST alignments found in that region and all available annotation for the region as well. For more detailed instructions as to the use of this control look <A href='<?php echo "${GDBDIR}tutorial/index.html"; ?>'>here</A>.</P>
</div>

<?php
require('SSI_GDBprep.php');
virtual("${CGIPATH}SSI_GDBgui.pl/STANDARD_FOOTER/" . $SSI_QUERYSTRING);
?>




See more files for this project here

eXtensible Genome Data Broker

The xGDB project provides scientists with an online portal for the integration of diverse sources of genomic data. Portals allow researchers to effectively target a specific scientific question by customizing their interactions with available data.

Project homepage: http://sourceforge.net/projects/xgdb
Programming language(s): JavaScript,Perl,PHP
License: other

  Annotation/
    index.php
  prj/
    index.php
  tmp/
  tutorial/
    index.php
  GDBstyle.css
  download.php
  index.php
  resource.php
  site_map.php