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cvbbdpre.h from Oscill8 at Krugle


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/*
 * -----------------------------------------------------------------
 * $Revision: 1.1 $
 * $Date: 2005/05/02 03:39:30 $
 * ----------------------------------------------------------------- 
 * Programmer(s): Michael Wittman, Alan C. Hindmarsh and
 *                Radu Serban @ LLNL
 * -----------------------------------------------------------------
 * Copyright (c) 2002, The Regents of the University of California.
 * Produced at the Lawrence Livermore National Laboratory.
 * All rights reserved.
 * For details, see sundials/cvodes/LICENSE.
 * -----------------------------------------------------------------
 * This is the header file for the CVBBDPRE module, for a
 * band-block-diagonal preconditioner, i.e. a block-diagonal
 * matrix with banded blocks, for use with CVSpgmr, and
 * the parallel implementation of the NVECTOR module.
 *
 * Summary:
 *
 * These routines provide a preconditioner matrix  that is
 * block-diagonal with banded blocks.  The blocking corresponds
 * to the distribution of the dependent variable vector y among
 * the processors.  Each preconditioner block is generated from
 * the Jacobian of the local part (on the current processor) of a
 * given function g(t,y) approximating f(t,y).  The blocks are
 * generated by a difference quotient scheme on each processor
 * independently.  This scheme utilizes an assumed banded
 * structure with given half-bandwidths, mudq and mldq.
 * However, the banded Jacobian block kept by the scheme has
 * half-bandwiths mukeep and mlkeep, which may be smaller.
 *
 * The user's calling program should have the following form:
 *
 *   #include "nvector_parallel.h"
 *   #include "cvbbdpre.h"
 *   ...
 *   void *cvode_mem;
 *   void *bbd_data;
 *   ...
 *   Set y0
 *   ...
 *   cvode_mem = CVodeCreate(...);
 *   ier = CVodeMalloc(...);
 *   ...
 *   bbd_data = CVBBDPrecAlloc(cvode_mem, Nlocal, mudq ,mldq,
 *                             mukeep, mlkeep, dqrely, gloc, cfn);
 *   flag = CVBBDSpgmr(cvode_mem, pretype, maxl, bbd_data);
 *   ...
 *   ier = CVode(...);
 *   ...
 *   CVBBDPrecFree(bbd_data);
 *   ...                                                           
 *   CVodeFree(...);
 * 
 *   Free y0
 *
 * The user-supplied routines required are:
 *
 *   f    = function defining the ODE right-hand side f(t,y).
 *
 *   gloc = function defining the approximation g(t,y).
 *
 *   cfn  = function to perform communication need for gloc.
 *
 * Notes:
 *
 * 1) This header file is included by the user for the definition
 *    of the CVBBDData type and for needed function prototypes.
 *
 * 2) The CVBBDPrecAlloc call includes half-bandwiths mudq and mldq
 *    to be used in the difference-quotient calculation of the
 *    approximate Jacobian.  They need not be the true
 *    half-bandwidths of the Jacobian of the local block of g,
 *    when smaller values may provide a greater efficiency.
 *    Also, the half-bandwidths mukeep and mlkeep of the retained
 *    banded approximate Jacobian block may be even smaller,
 *    to reduce storage and computation costs further.
 *    For all four half-bandwidths, the values need not be the
 *    same on every processor.
 *
 * 3) The actual name of the user's f function is passed to
 *    CVodeMalloc, and the names of the user's gloc and cfn
 *    functions are passed to CVBBDPrecAlloc.
 *
 * 4) The pointer to the user-defined data block f_data, which is
 *    set through CVodeSetFdata is also available to the user in
 *    gloc and cfn.
 *
 * 5) For the CVSpgmr solver, the Gram-Schmidt type gstype, is
 *    left to the user to specify through CVSpgmrSetGStype.
 *
 * 6) Optional outputs specific to this module are available by
 *    way of routines listed below.  These include work space sizes
 *    and the cumulative number of gloc calls.  The costs
 *    associated with this module also include nsetups banded LU
 *    factorizations, nlinsetups cfn calls, and npsolves banded
 *    backsolve calls, where nlinsetups and npsolves are
 *    integrator/CVSPGMR optional outputs.
 * -----------------------------------------------------------------
 */

#ifdef __cplusplus  /* wrapper to enable C++ usage */
extern "C" {
#endif

#ifndef _CVBBDPRE_H
#define _CVBBDPRE_H

#include "nvector.h"
#include "sundialstypes.h"

/*
 * -----------------------------------------------------------------
 * Type : CVLocalFn
 * -----------------------------------------------------------------
 * The user must supply a function g(t,y) which approximates the
 * right-hand side function f for the system y'=f(t,y), and which
 * is computed locally (without inter-processor communication).
 * (The case where g is mathematically identical to f is allowed.)
 * The implementation of this function must have type CVLocalFn.
 *
 * This function takes as input the local vector size Nlocal, the
 * independent variable value t, the local real dependent
 * variable vector y, and a pointer to the user-defined data
 * block f_data.  It is to compute the local part of g(t,y) and
 * store this in the vector g.
 * (Allocation of memory for y and g is handled within the
 * preconditioner module.)
 * The f_data parameter is the same as that specified by the user
 * through the CVodeSetFdata routine.
 * A CVLocalFn gloc does not have a return value.
 * -----------------------------------------------------------------
 */

typedef void (*CVLocalFn)(long int Nlocal, realtype t, N_Vector y,
                          N_Vector g, void *f_data);

/*
 * -----------------------------------------------------------------
 * Type : CVCommFn
 * -----------------------------------------------------------------
 * The user may supply a function of type CVCommFn which performs
 * all inter-processor communication necessary to evaluate the
 * approximate right-hand side function described above.
 *
 * This function takes as input the local vector size Nlocal,
 * the independent variable value t, the dependent variable
 * vector y, and a pointer to the user-defined data block f_data.
 * The f_data parameter is the same as that specified by the user
 * through the CVodeSetFdata routine.  The CVCommFn cfn is
 * expected to save communicated data in space defined within the
 * structure f_data.  Note: A CVCommFn cfn does not have a return value.
 *
 * Each call to the CVCommFn cfn is preceded by a call to the
 * RhsFn f with the same (t,y) arguments.  Thus cfn can omit any
 * communications done by f if relevant to the evaluation of g.
 * If all necessary communication was done by f, the user can
 * pass NULL for cfn in CVBBDPrecAlloc (see below).
 * -----------------------------------------------------------------
 */

typedef void (*CVCommFn)(long int Nlocal, realtype t, N_Vector y,
                         void *f_data);

/*
 * -----------------------------------------------------------------
 * Function : CVBBDPrecAlloc
 * -----------------------------------------------------------------
 * CVBBDPrecAlloc allocates and initializes a CVBBDData structure
 * to be passed to CVSpgmr (and used by CVBBDPrecSetup and
 * and CVBBDPrecSolve.
 *
 * The parameters of CVBBDPrecAlloc are as follows:
 *
 * cvode_mem is the pointer to the integrator memory.
 *
 * Nlocal is the length of the local block of the vectors y etc.
 *        on the current processor.
 *
 * mudq, mldq are the upper and lower half-bandwidths to be used
 *            in the difference-quotient computation of the local
 *            Jacobian block.
 *
 * mukeep, mlkeep are the upper and lower half-bandwidths of the
 *                retained banded approximation to the local Jacobian
 *                block.
 *
 * dqrely is an optional input.  It is the relative increment
 *        in components of y used in the difference quotient
 *        approximations.  To specify the default, pass 0.
 *        The default is dqrely = sqrt(unit roundoff).
 *
 * gloc is the name of the user-supplied function g(t,y) that
 *      approximates f and whose local Jacobian blocks are
 *      to form the preconditioner.
 *
 * cfn is the name of the user-defined function that performs
 *     necessary inter-processor communication for the
 *     execution of gloc.
 *
 * CVBBDPrecAlloc returns the storage allocated (type *void),
 * or NULL if the request for storage cannot be satisfied.
 * -----------------------------------------------------------------
 */

void *CVBBDPrecAlloc(void *cvode_mem, long int Nlocal, 
                     long int mudq, long int mldq, 
                     long int mukeep, long int mlkeep, 
                     realtype dqrely,
                     CVLocalFn gloc, CVCommFn cfn);

/*
 * -----------------------------------------------------------------
 * Function : CVBBDSpgmr
 * -----------------------------------------------------------------
 * CVBBDSpgmr links the CVBBDPRE preconditioner to the CVSPGMR
 * linear solver. It performs the following actions:
 *  1) Calls the CVSPGMR specification routine and attaches the
 *     CVSPGMR linear solver to the integrator memory;
 *  2) Sets the preconditioner data structure for CVSPGMR
 *  3) Sets the preconditioner setup routine for CVSPGMR
 *  4) Sets the preconditioner solve routine for CVSPGMR
 *
 * Its first 3 arguments are the same as for CVSpgmr (see
 * cvspgmr.h). The last argument is the pointer to the CVBBDPRE
 * memory block returned by CVBBDPrecAlloc.
 * Note that the user need not call CVSpgmr.
 *
 * Possible return values are:
 *    CVSPGMR_SUCCESS     if successful
 *    CVSPGMR_MEM_NULL    if the cvode memory was NULL
 *    CVSPGMR_LMEM_NULL   if the cvspgmr memory was NULL
 *    CVSPGMR_MEM_FAIL    if there was a memory allocation failure
 *    CVSPGMR_ILL_INPUT   if a required vector operation is missing
 *    CV_PDATA_NULL       if the bbd_data was NULL
 * -----------------------------------------------------------------
 */

int CVBBDSpgmr(void *cvode_mem, int pretype, int maxl, void *bbd_data);

/*
 * -----------------------------------------------------------------
 * Function : CVBBDPrecReInit
 * -----------------------------------------------------------------
 * CVBBDPrecReInit re-initializes the BBDPRE module when solving a
 * sequence of problems of the same size with CVSPGMR/CVBBDPRE,
 * provided there is no change in Nlocal, mukeep, or mlkeep.
 * After solving one problem, and after calling CVodeReInit to
 * re-initialize the integrator for a subsequent problem, call
 * CVBBDPrecReInit.  Then call CVSpgmrSet* functions if necessary
 * for any changes to CVSpgmr parameters, before calling CVode.
 *
 * The first argument to CVBBDPrecReInit must be the pointer pdata
 * that was returned by CVBBDPrecAlloc.  All other arguments have
 * the same names and meanings as those of CVBBDPrecAlloc.
 *
 * The return value of CVBBDPrecReInit is CV_SUCCESS, indicating
 * success, or CV_PDATA_NULL if bbd_data was NULL.
 * -----------------------------------------------------------------
 */

int CVBBDPrecReInit(void *bbd_data, long int mudq, long int mldq,
                    realtype dqrely, CVLocalFn gloc, CVCommFn cfn);

/*
 * -----------------------------------------------------------------
 * Function : CVBBDPrecFree
 * -----------------------------------------------------------------
 * CVBBDPrecFree frees the memory block bbd_data allocated by the
 * call to CVBBDAlloc.
 * -----------------------------------------------------------------
 */

void CVBBDPrecFree(void *bbd_data);

/*
 * -----------------------------------------------------------------
 * BBDPRE optional output extraction routines
 * -----------------------------------------------------------------
 * CVBBDPrecGetWorkSpace returns the BBDPRE real and integer workspace
 *                       sizes.
 * CVBBDPrecGetNumGfnEvals returns the number of calls to gfn.
 *
 * The return value of CVBBDPrecGet* is one of:
 *    CV_SUCCESS    if successful
 *    CV_PDATA_NULL if the bbd_data memory was NULL
 * -----------------------------------------------------------------
 */

int CVBBDPrecGetWorkSpace(void *bbd_data, long int *lenrwBBDP, long int *leniwBBDP);
int CVBBDPrecGetNumGfnEvals(void *bbd_data, long int *ngevalsBBDP);

#endif

#ifdef __cplusplus
}
#endif




See more files for this project here

Oscill8

Oscill8 is a suite of tools for analyzing dynamical systems which concentrates on understanding how the dynamical behavior depends on the parameters using bifurcation theory and reaction network theory.

Project homepage: http://sourceforge.net/projects/oscill8
Programming language(s): C,C#,C++
License: other

  ReadMe.txt
  band.c
  band.h
  cvband.c
  cvband.h
  cvband_impl.h
  cvbandpre.c
  cvbandpre.h
  cvbandpre_impl.h
  cvbbdpre.c
  cvbbdpre.h
  cvbbdpre_impl.h
  cvdense.c
  cvdense.h
  cvdense_impl.h
  cvdiag.c
  cvdiag.h
  cvdiag_impl.h
  cvodea.c
  cvodea.h
  cvodea_impl.h
  cvodes.c
  cvodes.h
  cvodes.vcproj
  cvodes_impl.h
  cvodesio.c
  cvspgmr.c
  cvspgmr.h
  cvspgmr_impl.h
  dense.c
  dense.h
  iterative.c
  iterative.h
  nvector.c
  nvector.h
  nvector_serial.c
  nvector_serial.h
  smalldense.c
  smalldense.h
  spgmr.c
  spgmr.h
  sundials_config.h
  sundialsmath.c
  sundialsmath.h
  sundialstypes.h